The zipped file provided gives GWAS results at 516131 tested SNPs. The rs ID and BP position (Genome Build 36) of each SNP is given, as well as the minor and major allele and minor allele frequency (MAF) in the UK control samples used. The alleles in these Illumina data are aligned to the vendor's definition of the TOP strand. The tested allele (usually the minor allele) is listed together with the allelic odds ratio (PlinkOR) and P value (PlinkP) from a logistic regression analysis in PLINK, using the top 10 principal component scores (PCs) as covariates. Also given is the P value (EMIMP) from a combined family-based/control analysis in EMIM. See Cordell et al. (2013) for further details.